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PDB entries with updated X-ray structure factor data
2ATR
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BU of 2atr by Molmil
Acetyltransferase, GNAT family protein SP0256 from Streptococcus pneumoniae TIGR4
Descriptor: acetyltransferase, GNAT family
Authors:Binkowski, T.A, Hatzos, C, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-25
Release date:2005-10-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Acetyltransferase, GNAT family protein SP0256 from Streptococcus pneumoniae
To be Published
3E64
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BU of 3e64 by Molmil
Fragment based discovery of JAK-2 inhibitors
Descriptor: 4-(3-amino-1H-indazol-5-yl)-N-tert-butylbenzenesulfonamide, Tyrosine-protein kinase JAK2
Authors:Antonysamy, S, Fang, W, Hirst, G, Park, F, Russell, M, Smyth, L, Sprengeler, P, Stappenbeck, F, Steensma, R, Thompson, D.A, Wilson, M, Wong, M, Zhang, A, Zhang, F.
Deposit date:2008-08-14
Release date:2008-10-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-based discovery of JAK-2 inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
3EYO
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BU of 3eyo by Molmil
Crystal structure of anti-human cytomegalovirus antibody 8F9
Descriptor: 8f9 Fab, AD-2
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-21
Release date:2008-12-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
3F12
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BU of 3f12 by Molmil
Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
Descriptor: 8f9 Fab, M2J1 Fab
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-27
Release date:2009-09-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
3I91
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BU of 3i91 by Molmil
Crystal structure of human chromobox homolog 8 (CBX8) with H3K9 peptide
Descriptor: Chromobox protein homolog 8, H3K9 peptide
Authors:Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2009-07-10
Release date:2009-09-08
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
7K3X
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BU of 7k3x by Molmil
SGMGCIT segment 58-64 from Keratin-8 with G62C mutation
Descriptor: ISOPROPYL ALCOHOL, SGMGCIT segment 58-64 from Keratin-8 with G62C mutation
Authors:Murray, K.A, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2020-09-14
Release date:2021-11-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.705 Å)
Cite:Identifying amyloid-related diseases by mapping mutations in low-complexity protein domains to pathologies.
Nat.Struct.Mol.Biol., 29, 2022
8TT9
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BU of 8tt9 by Molmil
X-ray structure of Macrophage Migration Inhibitory Factor (MIF) Covalently Bound to 4-hydroxyphenylpyruvate (HPP)
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor
Authors:Schroder, G.C, Meilleur, F, Nix, J.C, Crichlow, G.V, Lolis, E.J.
Deposit date:2023-08-13
Release date:2024-08-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray structure of Macrophage Migration Inhibitory Factor (MIF) Covalently Bound to 4-hydroxyphenylpyruvate (HPP)
To Be Published
9IR5
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Crystal structure of apo-form UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Roseburia faecis
Descriptor: 1,2-ETHANEDIOL, UDP-N-acetylmuramate--L-alanine ligase
Authors:Wang, Y.X, Du, Y.H.
Deposit date:2024-07-14
Release date:2025-04-09
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Unusual MurC Ligase and Peptidoglycan Discovered in Lachnospiraceae Using a Fluorescent L-Amino Acid Based Selective Labeling Probe.
Angew.Chem.Int.Ed.Engl., 64, 2025
9IR6
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Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Roseburia faecis in complex with UNAM
Descriptor: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, 1,2-ETHANEDIOL, UDP-N-acetylmuramate--L-alanine ligase
Authors:Wang, Y.X, Du, Y.H.
Deposit date:2024-07-14
Release date:2025-04-09
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Unusual MurC Ligase and Peptidoglycan Discovered in Lachnospiraceae Using a Fluorescent L-Amino Acid Based Selective Labeling Probe.
Angew.Chem.Int.Ed.Engl., 64, 2025
9LSW
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BU of 9lsw by Molmil
Crystal structure of the calcium-free mRFP1 with a grafted calcium-binding sequence
Descriptor: Red fluorescent protein,grafted calcium-binding sequence
Authors:Uehara, R, Kamiya, Y, Maeda, S, Okamoto, K, Toya, S, Chiba, R, Amesaka, H, Takano, K, Matsumura, H, Tanaka, S.-i.
Deposit date:2025-02-05
Release date:2025-06-04
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Enhanced secretion through type 1 secretion system by grafting a calcium-binding sequence to modify the folding of cargo proteins.
Protein Sci., 34, 2025

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PDB entries from 2025-06-11

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