1A6A
 
 | | THE STRUCTURE OF AN INTERMEDIATE IN CLASS II MHC MATURATION: CLIP BOUND TO HLA-DR3 | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ... | | Authors: | Ghosh, P, Amaya, M, Mellins, E, Wiley, D.C. | | Deposit date: | 1998-02-22 | | Release date: | 1998-05-27 | | Last modified: | 2024-10-23 | | Method: | X-RAY DIFFRACTION (2.75 Å) | | Cite: | The structure of an intermediate in class II MHC maturation: CLIP bound to HLA-DR3.
Nature, 378, 1995
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4DWL
 | | Avd molecule from Bordetella bacteriophage DGR | | Descriptor: | Bbp7, PHOSPHATE ION | | Authors: | Ghosh, P, Al-Ayyoubi, M. | | Deposit date: | 2012-02-24 | | Release date: | 2013-02-27 | | Last modified: | 2024-11-06 | | Method: | X-RAY DIFFRACTION (2.69 Å) | | Cite: | Structure of the essential diversity-generating retroelement protein bAvd and its functionally important interaction with reverse transcriptase.
Structure, 21, 2013
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1JYA
 | | Crystal Structure of SycE | | Descriptor: | YOPE regulator | | Authors: | Ghosh, P, Birtalan, S. | | Deposit date: | 2001-09-11 | | Release date: | 2001-10-31 | | Last modified: | 2024-10-30 | | Method: | X-RAY DIFFRACTION (1.74 Å) | | Cite: | Structure of the Yersinia type III secretory system chaperone SycE.
Nat.Struct.Biol., 8, 2001
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4D8M
 | | Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin | | Descriptor: | Pesticidal crystal protein cry5Ba | | Authors: | Fan, H, Hu, Y, Aroian, R.V, Ghosh, P, Berkeley Structural Genomics Center (BSGC) | | Deposit date: | 2012-01-10 | | Release date: | 2012-12-19 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structure and Glycolipid Binding Properties of the Nematicidal Protein Cry5B.
Biochemistry, 51, 2012
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4D9V
 | | Structure of the Type III Secretion System Protein | | Descriptor: | YscD; putative type III secretion protein | | Authors: | Gamez, A.M, Ghosh, P. | | Deposit date: | 2012-01-12 | | Release date: | 2012-09-26 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.519 Å) | | Cite: | Structure and interactions of the cytoplasmic domain of the Yersinia type III secretion protein YscD.
J.Bacteriol., 194, 2012
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8UB8
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active State 1a | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.28 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBE
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Resting State 1a | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.05 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBA
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active state 1b | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBB
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active State (N-empty) 1b | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.23 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBD
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Pre-active State 2 | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.05 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBC
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Resting State 1b | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.29 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UBF
 | | Diversity-generating retroelement (DGR) ribonucleoprotein - Resting state 1c | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.61 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UB7
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active state (N-occupied) | | Descriptor: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Avd, Diversity-generating retroelement (DGR) RNA Sp, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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8UB9
 | | Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase- Active state (N-empty) 1a | | Descriptor: | Avd, Diversity-generating retroelement (DGR) RNA Sp, Diversity-generating retroelement (DGR) RNA TR, ... | | Authors: | Biswas, T, Handa, S, Ghosh, P. | | Deposit date: | 2023-09-22 | | Release date: | 2024-10-23 | | Last modified: | 2025-03-12 | | Method: | ELECTRON MICROSCOPY (3.07 Å) | | Cite: | RNA control of reverse transcription in a diversity-generating retroelement.
Nature, 638, 2025
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7X7N
 | | 3D model of the 3-RBD up single trimeric spike protein of SARS-CoV2 in the presence of synthetic peptide SIH-5. | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, Synthetic peptide SIH-5 | | Authors: | Khatri, B, Pramanick, I, Malladi, S.K, Rajmani, R.S, Kumar, S, Ghosh, P, Sengupta, N, Rahisuddin, R, Kumaran, S, Ringe, R.P, Varadarajan, R, Dutta, S, Chatterjee, J. | | Deposit date: | 2022-03-10 | | Release date: | 2022-04-27 | | Last modified: | 2022-11-16 | | Method: | ELECTRON MICROSCOPY (4.47 Å) | | Cite: | A dimeric proteomimetic prevents SARS-CoV-2 infection by dimerizing the spike protein.
Nat.Chem.Biol., 18, 2022
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2UUN
 | | Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers. | | Descriptor: | BILIVERDINE IX ALPHA, C-PHYCOCYANIN, PHYCOCYANOBILIN | | Authors: | Satyanarayana, L, Patel, A, Mishra, S, K Ghosh, P, Suresh, C.G. | | Deposit date: | 2007-03-05 | | Release date: | 2008-05-13 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (3 Å) | | Cite: | Crystal Structure of C-Phycocyanin from Phormidium, Lyngbya Spp. (Marine) and Spirulina Sp. (Fresh Water) Shows Two Different Ways of Energy Transfer between Two Hexamers.
To be Published
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8TGT
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8TCB
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6FQ3
 | | Crystal structure of Danio rerio Lin41 filamin-NHL domains in complex with lin-29A 5'UTR 13mer RNA | | Descriptor: | CHLORIDE ION, E3 ubiquitin-protein ligase TRIM71, RNA (5'-R(*GP*GP*AP*GP*UP*CP*CP*AP*AP*CP*UP*CP*C)-3') | | Authors: | Kumari, P, Aeschimann, F, Gaidatzis, D, Keusch, J.J, Ghosh, P, Neagu, A, Pachulska-Wieczorek, K, Bujnicki, J.M, Gut, H, Grosshans, H, Ciosk, R. | | Deposit date: | 2018-02-13 | | Release date: | 2018-05-09 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (1.901 Å) | | Cite: | Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Nat Commun, 9, 2018
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2UUL
 | | Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers. | | Descriptor: | BILIVERDINE IX ALPHA, C-PHYCOCYANIN ALPHA CHAIN, C-PHYCOCYANIN BETA CHAIN, ... | | Authors: | Satyanarayana, L, Patel, A, Mishra, S, K Ghosh, P, Suresh, C.G. | | Deposit date: | 2007-03-04 | | Release date: | 2008-05-27 | | Last modified: | 2024-11-06 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Crystal Structure of C-Phycocyanin from Phormidium, Lyngbya Spp. (Marine) and Spirulina Sp. (Fresh Water) Shows Two Different Ways of Energy Transfer between Twohexamers.
To be Published
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6FQL
 | | Crystal structure of Danio rerio Lin41 filamin-NHL domains in complex with mab-10 3'UTR 13mer RNA | | Descriptor: | CHLORIDE ION, E3 ubiquitin-protein ligase TRIM71, RNA (5'-R(*UP*GP*CP*AP*UP*UP*UP*AP*AP*UP*GP*CP*A)-3') | | Authors: | Kumari, P, Aeschimann, F, Gaidatzis, D, Keusch, J.J, Ghosh, P, Neagu, A, Pachulska-Wieczorek, K, Bujnicki, J.M, Gut, H, Grosshans, H, Ciosk, R. | | Deposit date: | 2018-02-14 | | Release date: | 2018-05-09 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (2.349 Å) | | Cite: | Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Nat Commun, 9, 2018
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2XNY
 | | A fragment of streptococcal M1 protein in complex with human fibrinogen | | Descriptor: | FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ... | | Authors: | Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P. | | Deposit date: | 2010-08-06 | | Release date: | 2011-04-13 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (7.5 Å) | | Cite: | Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
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2XNX
 | | BC1 fragment of streptococcal M1 protein in complex with human fibrinogen | | Descriptor: | FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ... | | Authors: | Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P. | | Deposit date: | 2010-08-06 | | Release date: | 2011-04-13 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
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6FPT
 | | Crystal structure of Danio rerio Lin41 filamin-NHL domains | | Descriptor: | E3 ubiquitin-protein ligase TRIM71 | | Authors: | Kumari, P, Aeschimann, F, Gaidatzis, D, Keusch, J.J, Ghosh, P, Neagu, A, Pachulska-Wieczorek, K, Bujnicki, J.M, Gut, H, Grosshans, H, Ciosk, R. | | Deposit date: | 2018-02-12 | | Release date: | 2018-05-09 | | Last modified: | 2024-01-17 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Nat Commun, 9, 2018
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1AO7
 | | COMPLEX BETWEEN HUMAN T-CELL RECEPTOR, VIRAL PEPTIDE (TAX), AND HLA-A 0201 | | Descriptor: | BETA-2 MICROGLOBULIN, ETHYL MERCURY ION, HLA-A 0201, ... | | Authors: | Garboczi, D.N, Ghosh, P, Utz, U, Fan, Q.R, Biddison, W.E, Wiley, D.C. | | Deposit date: | 1997-07-21 | | Release date: | 1997-09-17 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Structure of the complex between human T-cell receptor, viral peptide and HLA-A2.
Nature, 384, 1996
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