Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 550 results

8X4K
DownloadVisualize
BU of 8x4k by Molmil
Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPDGlc
Descriptor: MAGNESIUM ION, SULFATE ION, Subversion of eukaryotic traffic protein A, ...
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPDGlc
To Be Published
8X4M
DownloadVisualize
BU of 8x4m by Molmil
Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPD
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPD
To Be Published
8X4N
DownloadVisualize
BU of 8x4n by Molmil
Crystal structure of the PI3P-binding domain of Legionella SetA in complex with inositol 1,3-bisphosphate
Descriptor: GLYCEROL, PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER, Subversion of eukaryotic traffic protein A
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of the PI3P-binding domain of Legionella SetA in complex with inositol 1,3-bisphosphate
To Be Published
8X4J
DownloadVisualize
BU of 8x4j by Molmil
Crystal structure of the glycosyltransferase domain of Legionella SetA (unbound)
Descriptor: MAGNESIUM ION, Subversion of eukaryotic traffic protein A
Authors:Im, H.N, Lee, Y, Jang, D.M, Hahn, H, Kim, H.S.
Deposit date:2023-11-15
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of Legionella effector SetA glycosyltransferase domain in the unbound form
To Be Published
8TQ2
DownloadVisualize
BU of 8tq2 by Molmil
Structure of the kinase lobe of human CDK8 kinase module
Descriptor: Cyclin-C, Cyclin-dependent kinase 8, Mediator of RNA polymerase II transcription subunit 12, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-06
Release date:2024-10-09
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
8TQC
DownloadVisualize
BU of 8tqc by Molmil
Structure of the human CDK8 kinase module
Descriptor: Cyclin-C, Cyclin-dependent kinase 8, Mediator of RNA polymerase II transcription subunit 12, ...
Authors:Chen, S.F, Chao, T.C, Kim, H.J, Tang, H.C, Khadka, S, Li, T, Murakami, K, Boyer, T.G, Tsai, K.L.
Deposit date:2023-08-06
Release date:2024-10-09
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of the human transcriptional Mediator regulated by its dissociable kinase module.
Mol.Cell, 84, 2024
4JJT
DownloadVisualize
BU of 4jjt by Molmil
The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
Descriptor: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
Authors:Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-03-08
Release date:2013-03-27
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
4ZZ7
DownloadVisualize
BU of 4zz7 by Molmil
Crystal structure of methylmalonate-semialdehyde dehydrogenase (DddC) from Oceanimonas doudoroffii
Descriptor: Methylmalonate-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Do, H, Lee, C.W, Lee, S.G, Kang, H, Park, C.M, Kim, H.J, Park, H, Park, H, Lee, J.H.
Deposit date:2015-05-22
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and modeling of the tetrahedral intermediate state of methylmalonate-semialdehyde dehydrogenase (MMSDH) from Oceanimonas doudoroffii.
J. Microbiol., 54, 2016
2XIU
DownloadVisualize
BU of 2xiu by Molmil
High resolution structure of MTSL-tagged CylR2.
Descriptor: CYLR2, GLYCEROL, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
Deposit date:2010-07-01
Release date:2011-02-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
2ZHY
DownloadVisualize
BU of 2zhy by Molmil
Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis
Descriptor: ATP:cob(I)alamin adenosyltransferase, putative
Authors:Moon, J.H, Park, A.K, Jang, E.H, Kim, H.S, Chi, Y.M.
Deposit date:2008-02-11
Release date:2008-07-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a PduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis.
Proteins, 72, 2008
5IPW
DownloadVisualize
BU of 5ipw by Molmil
oligopeptide-binding protein OppA
Descriptor: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative
Authors:Lee, H.H, Kim, H.J, Yoon, H.J.
Deposit date:2016-03-10
Release date:2017-03-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a putative oligopeptide-binding periplasmic protein from a hyperthermophile
Extremophiles, 20, 2016
6XKV
DownloadVisualize
BU of 6xkv by Molmil
R. capsulatus cyt bc1 with both FeS proteins in b position (CIII2 b-b)
Descriptor: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKT
DownloadVisualize
BU of 6xkt by Molmil
R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
Descriptor: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XI0
DownloadVisualize
BU of 6xi0 by Molmil
R. capsulatus cyt bc1 (CIII2) at 3.3A
Descriptor: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-19
Release date:2020-12-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKU
DownloadVisualize
BU of 6xku by Molmil
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
Descriptor: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKZ
DownloadVisualize
BU of 6xkz by Molmil
R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B)
Descriptor: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKW
DownloadVisualize
BU of 6xkw by Molmil
R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy
Descriptor: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP, Cytochrome b, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKX
DownloadVisualize
BU of 6xkx by Molmil
R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A)
Descriptor: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
5Y7D
DownloadVisualize
BU of 5y7d by Molmil
Crystal structure of human Endothelial-overexpressed LPS associated factor 1
Descriptor: CHLORIDE ION, GLYCEROL, Protein CXorf40A, ...
Authors:Park, S.H, Kim, M.J, Park, J.S, Kim, H.J, Han, B.W.
Deposit date:2017-08-17
Release date:2018-08-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal Structure of Human EOLA1 Implies Its Possibility of RNA Binding.
Molecules, 24, 2019
4OH9
DownloadVisualize
BU of 4oh9 by Molmil
Crystal Structure of the human MST2 SARAH homodimer
Descriptor: Serine/threonine-protein kinase 3
Authors:Hwang, E, Cheong, H.-K, Ul Mushtaq, A, Kim, H.-Y, Yeo, K.J, Kim, E, Lee, W.C, Hwang, K.Y, Cheong, C, Jeon, Y.H.
Deposit date:2014-01-17
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Structural basis of the heterodimerization of the MST and RASSF SARAH domains in the Hippo signalling pathway.
Acta Crystallogr.,Sect.D, 70, 2014
8YBE
DownloadVisualize
BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
Descriptor: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Yoo, Y, Park, K, Kim, H.
Deposit date:2024-02-13
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Atomic resolution structure of MBP using Cryo-EM
To Be Published
3E5N
DownloadVisualize
BU of 3e5n by Molmil
Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: D-alanine-D-alanine ligase A
Authors:Doan, T.N.T, Kim, J.K, Kim, H.S, Ahn, Y.J, Kim, J.G, Lee, B.M, Kang, L.W.
Deposit date:2008-08-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331
To be published
4OH8
DownloadVisualize
BU of 4oh8 by Molmil
Crystal Structure of the human MST1-RASSF5 SARAH heterodimer
Descriptor: Ras association domain-containing protein 5, Serine/threonine-protein kinase 4
Authors:Hwang, E, Cheong, H.-K, Ul Mushtaq, A, Kim, H.-Y, Yeo, K.J, Kim, E, Lee, W.C, Hwang, K.Y, Cheong, C, Jeon, Y.H.
Deposit date:2014-01-17
Release date:2014-07-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.281 Å)
Cite:Structural basis of the heterodimerization of the MST and RASSF SARAH domains in the Hippo signalling pathway.
Acta Crystallogr.,Sect.D, 70, 2014
3QD6
DownloadVisualize
BU of 3qd6 by Molmil
Crystal structure of the CD40 and CD154 (CD40L) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD40 ligand, Tumor necrosis factor receptor superfamily member 5
Authors:Lee, J.-O, Kim, Y.J, Song, D.H, Kim, H.M, Park, B.S.
Deposit date:2011-01-18
Release date:2011-02-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallographic and mutational analysis of the CD40-CD154 complex and its implications for receptor activation
J.Biol.Chem., 286, 2011
2HK1
DownloadVisualize
BU of 2hk1 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose
Descriptor: D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION
Authors:Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
Deposit date:2006-07-03
Release date:2006-08-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon
OSZAR »