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PDB: 299 results

5DY3
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BU of 5dy3 by Molmil
Crystal structure of Dbr2
Descriptor: Artemisinic aldehyde Delta(11(13)) reductase, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Li, L, Chen, T.T, Xu, Y.C.
Deposit date:2015-09-24
Release date:2016-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Crystal structure of Dbr2
to be published
8WMG
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BU of 8wmg by Molmil
Structure of ConA/Man3
Descriptor: 4-[3,5-bis(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
8WMK
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BU of 8wmk by Molmil
Structure of ConA/Man2
Descriptor: 4-[3-(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
5DXX
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BU of 5dxx by Molmil
Crystal structure of Dbr2
Descriptor: Artemisinic aldehyde Delta(11(13)) reductase, FLAVIN MONONUCLEOTIDE
Authors:Li, L, Chen, T.T, Xu, Y.C.
Deposit date:2015-09-24
Release date:2016-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Crystal structure of Dbr2
to be published
5DY2
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BU of 5dy2 by Molmil
Crystal structure of Dbr2 with mutation M27L
Descriptor: 1,6-DIHYDROXY NAPHTHALENE, Artemisinic aldehyde Delta(11(13)) reductase, FLAVIN MONONUCLEOTIDE
Authors:Li, L, Chen, T.T, Xu, Y.C.
Deposit date:2015-09-24
Release date:2016-10-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The Crystal structure of Dbr2
to be published
9J1D
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BU of 9j1d by Molmil
Structure of ConA/PHE-Man
Descriptor: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION, ...
Authors:Li, L, Chen, G.
Deposit date:2024-08-04
Release date:2024-12-04
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure of ConA/PHE-Man
To Be Published
9J1A
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BU of 9j1a by Molmil
Structure of ConA without ligand
Descriptor: CALCIUM ION, Concanavalin-A, GLYCEROL, ...
Authors:Li, L, Chen, G.
Deposit date:2024-08-04
Release date:2024-12-04
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure of ConA without ligand
To Be Published
5Y4Z
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BU of 5y4z by Molmil
Crystal structure of the Zika virus NS3 helicase complex with AMPPNP
Descriptor: MANGANESE (II) ION, NS3 helicase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Li, L.
Deposit date:2017-08-06
Release date:2017-08-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural view of the helicase reveals that Zika virus uses a conserved mechanism for unwinding RNA
Acta Crystallogr.,Sect.F, 74, 2018
9J1B
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BU of 9j1b by Molmil
Structure of ConA/IMI-Man
Descriptor: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION, ...
Authors:Li, L, Chen, G.
Deposit date:2024-08-04
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure of ConA/IMI-Man
To Be Published
5VNQ
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BU of 5vnq by Molmil
Neutron crystallographic structure of perdeuterated T4 lysozyme cysteine-free pseudo-wild type at cryogenic temperature
Descriptor: CHLORIDE ION, Endolysin
Authors:Li, L, Shukla, S, Meilleur, F, Standaert, R.F, Pierce, J, Myles, D.A.A, Cuneo, M.J.
Deposit date:2017-05-01
Release date:2017-07-26
Last modified:2023-10-04
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:Neutron crystallographic studies of T4 lysozyme at cryogenic temperature.
Protein Sci., 26, 2017
5VNR
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BU of 5vnr by Molmil
X-ray structure of perdeuterated T4 lysozyme cysteine-free pseudo-wild type at cryogenic temperature
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Endolysin, ...
Authors:Li, L, Shukla, S, Meilleur, F, Standaert, R.F, Pierce, J, Myles, D.A.A, Cuneo, M.J.
Deposit date:2017-05-01
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Neutron crystallographic studies of T4 lysozyme at cryogenic temperature.
Protein Sci., 26, 2017
3MUU
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BU of 3muu by Molmil
Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH
Descriptor: Structural polyprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
4FQA
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BU of 4fqa by Molmil
Crystal structure of toxic effector Tse1
Descriptor: toxic effector Tse1
Authors:Li, L, Zhang, W, Wang, T.
Deposit date:2012-06-25
Release date:2013-06-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight on toxic effector Tse1
To be Published
3MUW
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BU of 3muw by Molmil
Pseudo-atomic structure of the E2-E1 protein shell in Sindbis virus
Descriptor: Structural polyprotein
Authors:Li, L, Jose, J, Xiang, Y, Kuhn, R.J, Rossmann, M.G.
Deposit date:2010-05-03
Release date:2010-11-24
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural changes of envelope proteins during alphavirus fusion.
Nature, 468, 2010
4MLS
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BU of 4mls by Molmil
Crystal structure of the SpyTag and SpyCatcher-deltaN1 complex
Descriptor: Fibronectin binding protein, SpyTag
Authors:Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M.
Deposit date:2013-09-06
Release date:2013-11-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag.
J.Mol.Biol., 426, 2014
6KOP
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BU of 6kop by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.303 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KOQ
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BU of 6koq by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.353 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KON
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BU of 6kon by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt
Descriptor: DNA (5'-D(P*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(P*GP*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KOO
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BU of 6koo by Molmil
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt
Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2019-08-12
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
4MLI
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BU of 4mli by Molmil
Crystal structure of the SpyTag/SpyCatcher complex
Descriptor: Fibronectin binding protein, SpyTag
Authors:Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M.
Deposit date:2013-09-06
Release date:2013-11-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag.
J.Mol.Biol., 426, 2014
7EH2
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BU of 7eh2 by Molmil
Thermus thermophilus transcription initiation complex containing a template-strand pyrimidine at position TSS-2 and GpG RNA primer
Descriptor: DNA (27-MER), DNA (5'-D(*CP*C*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*AP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Li, L, Zhang, Y.
Deposit date:2021-03-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli .
Proc.Natl.Acad.Sci.USA, 118, 2021
7DU2
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BU of 7du2 by Molmil
RNA polymerase III EC complex in post-translocation state
Descriptor: DNA (5'-D(P*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*T)-3'), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y.
Deposit date:2021-01-07
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structure of human RNA polymerase III elongation complex.
Cell Res., 31, 2021
7DN3
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BU of 7dn3 by Molmil
Structure of Human RNA Polymerase III elongation complex
Descriptor: DNA (5'-D(P*TP*CP*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*TP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y.
Deposit date:2020-12-08
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of human RNA polymerase III elongation complex.
Cell Res., 31, 2021
7EH1
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BU of 7eh1 by Molmil
Thermus thermophilus transcription initiation complex containing a template-strand purine at position TSS-2, GpG RNA primer, and CMPcPP
Descriptor: 1,4-BUTANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (27-MER), ...
Authors:Li, L, Zhang, Y.
Deposit date:2021-03-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli .
Proc.Natl.Acad.Sci.USA, 118, 2021
7EH0
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BU of 7eh0 by Molmil
Thermus thermophilus RNA polymerase transcription initiation complex containing a template-strand purine at position TSS-2, UpA RNA primer and CMPcPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (27-MER), DNA (5'-D(*CP*C*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*AP*AP*AP*G)-3'), ...
Authors:Li, L, Zhang, Y.
Deposit date:2021-03-27
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.808 Å)
Cite:Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli .
Proc.Natl.Acad.Sci.USA, 118, 2021

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