PDB Search results for query - 일본 단백질구조 데이터 뱅크

PDB: 74 results

A PRE-TRANSITION STATE MIMIC OF AN ENZYME: X-RAY STRUCTURE OF ADENOSINE DEAMINASE WITH BOUND 1-DEAZA-ADENOSINE AND ZINC-ACTIVATED WATER
Descriptor:	1-DEAZA-ADENOSINE, ADENOSINE DEAMINASE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1992-12-22
Release date:	1994-01-31
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	A pre-transition-state mimic of an enzyme: X-ray structure of adenosine deaminase with bound 1-deazaadenosine and zinc-activated water. Biochemistry, 32, 1993

2ADA

ATOMIC STRUCTURE OF ADENOSINE DEAMINASE COMPLEXED WITH A TRANSITION-STATE ANALOG: UNDERSTANDING CATALYSIS AND IMMUNODEFICIENCY MUTATIONS
Descriptor:	6-HYDROXY-7,8-DIHYDRO PURINE NUCLEOSIDE, ADENOSINE DEAMINASE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1994-12-02
Release date:	1995-03-31
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Atomic structure of adenosine deaminase complexed with a transition-state analog: understanding catalysis and immunodeficiency mutations. Science, 252, 1991

1ADS

AN UNLIKELY SUGAR SUBSTRATE SITE IN THE 1.65 ANGSTROMS STRUCTURE OF THE HUMAN ALDOSE REDUCTASE HOLOENZYME IMPLICATED IN DIABETIC COMPLICATIONS
Descriptor:	ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1992-07-08
Release date:	1993-10-31
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	An unlikely sugar substrate site in the 1.65 A structure of the human aldose reductase holoenzyme implicated in diabetic complications. Science, 257, 1992

1ABF

SUBSTRATE SPECIFICITY AND AFFINITY OF A PROTEIN MODULATED BY BOUND WATER MOLECULES
Descriptor:	L-ARABINOSE-BINDING PROTEIN, alpha-D-fucopyranose, beta-D-fucopyranose
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1992-04-23
Release date:	1993-10-31
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Substrate specificity and affinity of a protein modulated by bound water molecules. Nature, 340, 1989

5V4T

Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form)
Descriptor:	1,2-ETHANEDIOL, FE (III) ION, hypothetic aldehyde deformylating oxygenase
Authors:	Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2017-03-10
Release date:	2018-03-14
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form) To Be Published

5UXG

Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (monoclinic)
Descriptor:	PHOSPHATE ION, aldehyde deformylating oxygenase
Authors:	Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2017-02-22
Release date:	2018-02-28
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.72 Å)
Cite:	Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (monoclinic) To Be Published

1YFQ

High resolution S. cerevisiae Bub3 mitotic checkpoint protein
Descriptor:	ACETATE ION, CALCIUM ION, Cell cycle arrest protein BUB3
Authors:	Wilson, D.K, Cerna, D, Chew, E.
Deposit date:	2005-01-03
Release date:	2005-01-11
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (1.1 Å)
Cite:	The 1.1-a structure of the spindle checkpoint protein bub3p reveals functional regions. J.Biol.Chem., 280, 2005

1UIP

ADENOSINE DEAMINASE (HIS 238 GLU MUTANT)
Descriptor:	ADENOSINE DEAMINASE, PURINE RIBOSIDE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1996-08-30
Release date:	1997-06-24
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Site-directed mutagenesis of histidine 238 in mouse adenosine deaminase: substitution of histidine 238 does not impede hydroxylate formation. Biochemistry, 35, 1996

1UIO

ADENOSINE DEAMINASE (HIS 238 ALA MUTANT)
Descriptor:	6-HYDROXY-7,8-DIHYDRO PURINE NUCLEOSIDE, ADENOSINE DEAMINASE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1996-08-30
Release date:	1997-06-24
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Site-directed mutagenesis of histidine 238 in mouse adenosine deaminase: substitution of histidine 238 does not impede hydroxylate formation. Biochemistry, 35, 1996

1FKW

MURINE ADENOSINE DEAMINASE (D295E)
Descriptor:	ADENOSINE DEAMINASE, PURINE RIBOSIDE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1996-02-29
Release date:	1996-08-01
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Probing the functional role of two conserved active site aspartates in mouse adenosine deaminase. Biochemistry, 35, 1996

1FKX

MURINE ADENOSINE DEAMINASE (D296A)
Descriptor:	6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE, ADENOSINE DEAMINASE, ZINC ION
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1996-02-29
Release date:	1996-08-01
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Probing the functional role of two conserved active site aspartates in mouse adenosine deaminase. Biochemistry, 35, 1996

1FRB

FR-1 PROTEIN/NADPH/ZOPOLRESTAT COMPLEX
Descriptor:	3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID, FR-1 PROTEIN, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1995-08-08
Release date:	1996-10-14
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	1.7 A structure of FR-1, a fibroblast growth factor-induced member of the aldo-keto reductase family, complexed with coenzyme and inhibitor. Biochemistry, 34, 1995

5UX1

Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus
Descriptor:	FE (III) ION, tRNA-(MS(2)IO(6)A)-hydroxylase-like
Authors:	Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2017-02-21
Release date:	2018-02-28
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus To Be Published

5UXI

Protein 4 with aldehyde deformylating oxygenase activity from Nostoc puntiforme
Descriptor:	Aldehyde decarbonylase, DECYLAMINE-N,N-DIMETHYL-N-OXIDE
Authors:	Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2017-02-22
Release date:	2018-02-28
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Protein 4 with aldehyde deformylating oxygenase activity from Nostoc puntiforme To Be Published

5UX2

Protein 19 with aldehyde deformylating oxidase activity from Synechococcus
Descriptor:	Aldehyde decarbonylase, FE (III) ION, PROPANOIC ACID
Authors:	Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2017-02-21
Release date:	2018-02-28
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (1.99 Å)
Cite:	Protein 19 with aldehyde deformylating oxidase activity from Synechococcus To Be Published

5UWZ

Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus
Descriptor:	1,2-ETHANEDIOL, Aldehyde decarbonylase, STEARIC ACID
Authors:	Wilson, D.K.
Deposit date:	2017-02-21
Release date:	2018-02-28
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.25 Å)
Cite:	Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus To Be Published

3CZM

T. Gondii bradyzoite-specific LDH (LDH2) in complex with NAD and OXQ
Descriptor:	4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID, L-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:	Wilson, D.K, Susko, M.S.
Deposit date:	2008-04-29
Release date:	2009-06-02
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	T. Gondii bradyzoite-specific LDH (LDH2) in complex with NAD and OXQ To be Published

1MAR

REFINED 1.8 ANGSTROMS STRUCTURE OF HUMAN ALDOSE REDUCTASE COMPLEXED WITH THE POTENT INHIBITOR ZOPOLRESTAT
Descriptor:	3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID, ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:	Wilson, D.K, Quiocho, F.A.
Deposit date:	1993-07-20
Release date:	1995-07-20
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Refined 1.8 A structure of human aldose reductase complexed with the potent inhibitor zopolrestat. Proc.Natl.Acad.Sci.USA, 90, 1993

5EBU

Aerococcus viridans L-lactate oxidase Y215F mutant
Descriptor:	FLAVIN MONONUCLEOTIDE, L-lactate oxidase, PYRUVIC ACID
Authors:	Rainer, D, Nidetzky, B, Wilson, D.K.
Deposit date:	2015-10-19
Release date:	2016-06-29
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Conformational flexibility related to enzyme activity: evidence for a dynamic active-site gatekeeper function of Tyr(215) in Aerococcus viridans lactate oxidase. Sci Rep, 6, 2016

1K8C

Crystal structure of dimeric xylose reductase in complex with NADP(H)
Descriptor:	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, xylose reductase
Authors:	Kavanagh, K.L, Klimacek, M, Nidetzky, B, Wilson, D.K.
Deposit date:	2001-10-23
Release date:	2002-07-05
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	The structure of apo and holo forms of xylose reductase, a dimeric aldo-keto reductase from Candida tenuis. Biochemistry, 41, 2002

6D9F

Protein 60 with aldehyde deformylating oxidase activity from Kitasatospora setae
Descriptor:	1,2-ETHANEDIOL, FE (III) ION, Putative VlmB homolog, ...
Authors:	Arenas, R, Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:	2018-04-28
Release date:	2019-05-08
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.03 Å)
Cite:	Discovery, Design, and Structural Characterization of Alkane-Producing Enzymes across the Ferritin-like Superfamily. Biochemistry, 59, 2020

5VLV

The apo form of the triclocarban-binding single domain camelid nanobody VHH T9
Descriptor:	Single Domain Camelid Nanobody VHH T9
Authors:	Tabares-da Rosa, S, Gonzalez-Sapienza, G, Wilson, D.K.
Deposit date:	2017-04-26
Release date:	2018-05-02
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.35 Å)
Cite:	Structure and specificity of several triclocarban-binding single domain camelid antibody fragments. J. Mol. Recognit., 32, 2019

5VM0

The hapten triclocarban bound to the single domain camelid nanobody VHH T9
Descriptor:	1,2-ETHANEDIOL, Camelid Nanobody VHH T9, N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea
Authors:	Wogulis, L.A, Wogulis, M.D, Tabares-da Rosa, S, Gonzalez-Sapienza, G, Wilson, D.K.
Deposit date:	2017-04-26
Release date:	2018-05-02
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.79 Å)
Cite:	Structure and specificity of several triclocarban-binding single domain camelid antibody fragments. J. Mol. Recognit., 32, 2019

5VM6

The hapten triclocarban bound to the single domain camelid nanobody VHH T10
Descriptor:	N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea, SODIUM ION, SULFATE ION, ...
Authors:	Tabares-da Rosa, S, Gonzalez-Sapienza, G, Wilson, D.K.
Deposit date:	2017-04-26
Release date:	2018-05-02
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Structure and specificity of several triclocarban-binding single domain camelid antibody fragments. J. Mol. Recognit., 32, 2019

5VL2

The hapten triclocarban bound to the single domain camelid nanobody VHH T4
Descriptor:	N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea, T4 nanobody
Authors:	Tabares-da Rosa, S, Gonzalez-Sapienza, G, Wilson, D.K.
Deposit date:	2017-04-24
Release date:	2018-04-25
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structure and specificity of several triclocarban-binding single domain camelid antibody fragments. J. Mol. Recognit., 32, 2019

12 3 >

Total results:	74
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Wilson, D.K."