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3NE8

The crystal structure of a domain from N-acetylmuramoyl-l-alanine amidase of Bartonella henselae str. Houston-1

Summary for 3NE8
Entry DOI10.2210/pdb3ne8/pdb
DescriptorN-acetylmuramoyl-l-alanine amidase, ZINC ION, ACETATE ION, ... (6 entities in total)
Functional Keywordsstructural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
Biological sourceBartonella henselae
Total number of polymer chains1
Total formula weight26734.05
Authors
Tan, K.,Rakowski, E.,Buck, K.,Joachimiak, A.,Midwest Center for Structural Genomics (MCSG) (deposition date: 2010-06-08, release date: 2010-07-14, Last modification date: 2024-11-06)
Primary citationYang, D.C.,Tan, K.,Joachimiak, A.,Bernhardt, T.G.
A conformational switch controls cell wall-remodelling enzymes required for bacterial cell division.
Mol.Microbiol., 85:768-781, 2012
Cited by
PubMed Abstract: Remodelling of the peptidoglycan (PG) exoskeleton is intimately tied to the growth and division of bacteria. Enzymes that hydrolyse PG are critical for these processes, but their activities must be tightly regulated to prevent the generation of lethal breaches in the PG matrix. Despite their importance, the mechanisms regulating PG hydrolase activity have remained elusive. Here we investigate the control of cell division hydrolases called amidases (AmiA, AmiB and AmiC) required for Escherichia coli cell division. Poorly regulated amiB mutants were isolated encoding lytic AmiB variants with elevated basal PG hydrolase activities in vitro. The structure of an AmiB orthologue was also solved, revealing that the active site of AmiB is occluded by a conserved alpha helix. Strikingly, most of the amino acid substitutions in the lytic AmiB variants mapped to this domain and are predicted to disrupt its interaction with the active site. Our results therefore support a model in which cell separation is stimulated by the reversible relief of amidase autoinhibition governed by conserved subcomplexes within the cytokinetic ring. Analogous conformational control mechanisms are likely to be part of a general strategy used to control PG hydrolases present within multienzyme PG-remodelling machines.
PubMed: 22715947
DOI: 10.1111/j.1365-2958.2012.08138.x
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.239 Å)
Structure validation

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