Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SVA

Crystal structure of V57D mutant of human cystatin C

Summary for 3SVA
Entry DOI10.2210/pdb3sva/pdb
DescriptorCystatin-C, DI(HYDROXYETHYL)ETHER, ACETATE ION, ... (4 entities in total)
Functional Keywords3d domain swapping, cysteine protease inhibitor, hydrolase inhibitor
Biological sourceHomo sapiens (human)
Cellular locationSecreted : P01034
Total number of polymer chains1
Total formula weight13546.26
Authors
Orlikowska, M.,Szymanska, A.,Borek, D.,Otwinowski, Z.,Skowron, P.,Jankowska, E. (deposition date: 2011-07-12, release date: 2012-08-01, Last modification date: 2024-10-09)
Primary citationOrlikowska, M.,Szymanska, A.,Borek, D.,Otwinowski, Z.,Skowron, P.,Jankowska, E.
Structural characterization of V57D and V57P mutants of human cystatin C, an amyloidogenic protein.
Acta Crystallogr.,Sect.D, 69:577-586, 2013
Cited by
PubMed Abstract: Wild-type human cystatin C (hCC wt) is a low-molecular-mass protein (120 amino-acid residues, 13,343 Da) that is found in all nucleated cells. Physiologically, it functions as a potent regulator of cysteine protease activity. While the biologically active hCC wt is a monomeric protein, all crystallization efforts to date have resulted in a three-dimensional domain-swapped dimeric structure. In the recently published structure of a mutated hCC, the monomeric fold was preserved by a stabilization of the conformationally constrained loop L1 caused by a single amino-acid substitution: Val57Asn. Additional hCC mutants were obtained in order to elucidate the relationship between the stability of the L1 loop and the propensity of human cystatin C to dimerize. In one mutant Val57 was substituted by an aspartic acid residue, which is favoured in β-turns, and in the second mutant proline, a residue known for broadening turns, was substituted for the same Val57. Here, 2.26 and 3.0 Å resolution crystal structures of the V57D andV57P mutants of hCC are reported and their dimeric architecture is discussed in terms of the stabilization and destabilization effects of the introduced mutations.
PubMed: 23519666
DOI: 10.1107/S0907444912051657
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (3.02 Å)
Structure validation

236963

PDB entries from 2025-06-04

PDB statisticsPDBj update infoContact PDBjnumon
OSZAR »