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4UA1

Crystal structure of dual function transcriptional regulator MerR form Bacillus megaterium MB1 in complex with mercury (II) ion

Summary for 4UA1
Entry DOI10.2210/pdb4ua1/pdb
Related4UA2
DescriptorRegulatory protein, MERCURY (II) ION (3 entities in total)
Functional Keywordsmetalloregulatory protein, dna binding protein
Biological sourceBacillus megaterium
Total number of polymer chains2
Total formula weight32398.67
Authors
Chang, C.C.,Lin, L.Y.,Zou, X.W.,Huang, C.C.,Chan, N.L. (deposition date: 2014-08-07, release date: 2015-07-22, Last modification date: 2024-03-20)
Primary citationChang, C.C.,Lin, L.Y.,Zou, X.W.,Huang, C.C.,Chan, N.L.
Structural basis of the mercury(II)-mediated conformational switching of the dual-function transcriptional regulator MerR
Nucleic Acids Res., 43:7612-7623, 2015
Cited by
PubMed Abstract: The mer operon confers bacterial resistance to inorganic mercury (Hg(2+)) and organomercurials by encoding proteins involved in sensing, transport and detoxification of these cytotoxic agents. Expression of the mer operon is under tight control by the dual-function transcriptional regulator MerR. The metal-free, apo MerR binds to the mer operator/promoter region as a repressor to block transcription initiation, but is converted into an activator upon Hg(2+)-binding. To understand how MerR interacts with Hg(2+) and how Hg(2+)-binding modulates MerR function, we report here the crystal structures of apo and Hg(2+)-bound MerR from Bacillus megaterium, corresponding respectively to the repressor and activator conformation of MerR. To our knowledge, the apo-MerR structure represents the first visualization of a MerR family member in its intact and inducer-free form. And the Hg(2+)-MerR structure offers the first view of a triligated Hg(2+)-thiolate center in a metalloprotein, confirming that MerR binds Hg(2+) via trigonal planar coordination geometry. Structural comparison revealed the conformational transition of MerR is coupled to the assembly/disassembly of a buried Hg(2+) binding site, thereby providing a structural basis for the Hg(2+)-mediated functional switching of MerR. The pronounced Hg(2+)-induced repositioning of the MerR DNA-binding domains suggests a plausible mechanism for the transcriptional regulation of the mer operon.
PubMed: 26150423
DOI: 10.1093/nar/gkv681
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.56 Å)
Structure validation

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