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PDB: 860 results

4UR8
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Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
Descriptor: 2-OXOADIPIC ACID, FORMIC ACID, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2014-06-26
Release date:2014-12-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
8RTZ
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The structure of E. coli penicillin binding protein 3 (PBP3) in complex with a bicyclic peptide inhibitor
Descriptor: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Bicyclic peptide inhibitor, Peptidoglycan D,D-transpeptidase FtsI
Authors:Newman, H, Rowland, C.E, Dods, R, Lewis, N, Stanway, S.J, Bellini, D, Beswick, P.
Deposit date:2024-01-29
Release date:2024-04-03
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery and chemical optimisation of a potent, Bi-cyclic antimicrobial inhibitor of Escherichia coli PBP3.
Commun Biol, 8, 2025
5A9R
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Apo form of Imine reductase from Amycolatopsis orientalis
Descriptor: ACETATE ION, IMINE REDUCTASE
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2015-07-22
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Stereoselectivity and Structural Characterization of an Imine Reductase (Ired) from Amycolatopsis Orientalis
Acs Catalysis, 6, 2016
5A9T
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Imine Reductase from Amycolatopsis orientalis in complex with (R)- Methyltetrahydroisoquinoline
Descriptor: (1R)-1-methyl-1,2,3,4-tetrahydroisoquinoline, ACETATE ION, CALCIUM ION, ...
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2015-07-22
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stereoselectivity and Structural Characterization of an Imine Reductase (Ired) from Amycolatopsis Orientalis
Acs Catalysis, 6, 2016
4UUY
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Structural Identification of the Vps18 beta-propeller reveals a critical role in the HOPS complex stability and function.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Behrmann, H, Gohlke, U, Heinemann, U.
Deposit date:2014-08-01
Release date:2014-10-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural Identification of the Vps18 Beta-Propeller Reveals a Critical Role in the Hops Complex Stability and Function.
J.Biol.Chem., 289, 2014
7KOG
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Lethocerus Myosin II complete coiled-coil domain resolved in its native environment
Descriptor: Myosin heavy chain isoform Mhc_X1
Authors:Rahmani, H, Hu, Z, Daneshparvar, N, Taylor, D, Taylor, K.A.
Deposit date:2020-11-09
Release date:2021-03-24
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:The myosin II coiled-coil domain atomic structure in its native environment.
Proc.Natl.Acad.Sci.USA, 118, 2021
4CPD
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Alcohol dehydrogenase TADH from Thermus sp. ATN1
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Man, H, Gargulio, S, Frank, A, Hollmann, F, Grogan, G.
Deposit date:2014-02-05
Release date:2014-12-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structure of the Nadh-Dependent Thermostable Alcohol Dehydrogenase Tadh from Thermus Sp. Atn1 Provides a Platform for Engineering Specificity and Improved Compatibility with Inorganic Cofactor-Regeneration Catalysts
J.Mol.Catal., B Enzym., 105, 2014
4UR7
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Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate
Descriptor: FORMIC ACID, GLYCEROL, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2014-06-26
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
4BMN
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apo structure of short-chain alcohol dehydrogenase from Ralstonia sp. DSM 6428
Descriptor: 1,2-ETHANEDIOL, ALCLOHOL DEHYDROGENASE/SHORT-CHAIN DEHYDROGENASE, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Man, H, Kulig, J, Rother, D, Grogan, G.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium Spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones
Top.Catal., 57, 2014
4C4O
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BU of 4c4o by Molmil
Structure of carbonyl reductase CPCR2 from Candida parapsilosis in complex with NADH
Descriptor: 1,2-ETHANEDIOL, CARBONYL REDUCTASE CPCR2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Man, H, Loderer, C, Ansorge-Schumacher, M, Grogan, G.
Deposit date:2013-09-06
Release date:2014-07-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Nadh-Dependent Carbonyl Reductase (Cpcr2) from Candida Parapsilosis Provides Insight Into Mutations that Improve Catalytic Properties
Chemcatchem, 6, 2014
4BMS
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BU of 4bms by Molmil
Short chain alcohol dehydrogenase from Ralstonia sp. DSM 6428 in complex with NADPH
Descriptor: ALCLOHOL DEHYDROGENASE/SHORT-CHAIN DEHYDROGENASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Man, H, Kulig, J, Rother, D, Grogan, G.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium Spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones
Top.Catal., 57, 2014
4BMV
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BU of 4bmv by Molmil
Short-chain dehydrogenase from Sphingobium yanoikuyae in complex with NADPH
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SHORT-CHAIN DEHYDROGENASE
Authors:Man, H, Kedziora, K, Lavandera-Garcia, I, Gotor-Fernandez, V, Grogan, G.
Deposit date:2013-05-10
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium Spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones
Top.Catal., 57, 2014
4D3S
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BU of 4d3s by Molmil
Imine reductase from Nocardiopsis halophila
Descriptor: IMINE REDUCTASE, octyl beta-D-glucopyranoside
Authors:Man, H, Hart, S, Turkenburg, J.P, Grogan, G.
Deposit date:2014-10-23
Release date:2015-04-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure, Activity and Stereoselectivity of Nadph-Dependent Oxidoreductases Catalysing the S-Selective Reduction of the Imine Substrate 2-Methylpyrroline.
Chembiochem, 16, 2015
5A9S
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BU of 5a9s by Molmil
NADPH complex of Imine Reductase from Amycolatopsis orientalis
Descriptor: CALCIUM ION, IMINE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2015-07-22
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Stereoselectivity and Structural Characterization of an Imine Reductase (IRED) from Amycolatopsis orientalis
Acs Catalysis, 6, 2016
4D3D
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BU of 4d3d by Molmil
Structure of Imine Reductase BcSIRED from Bacillus cereus BAG3X2
Descriptor: IMINE REDUCTASE, MAGNESIUM ION, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL
Authors:Man, H, Hart, S, Turkenburg, J.P, Grogan, G.
Deposit date:2014-10-21
Release date:2015-04-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure, Activity and Stereoselectivity of Nadph-Dependent Oxidoreductases Catalysing the S-Selective Reduction of the Imine Substrate 2-Methylpyrroline.
Chembiochem, 16, 2015
4D3F
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BU of 4d3f by Molmil
BcSIRED from Bacillus cereus in complex with NADPH
Descriptor: IMINE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Man, H, Hart, S, Turkenburg, J.P, Grogan, G.
Deposit date:2014-10-21
Release date:2015-04-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure, Activity and Stereoselectivity of Nadph-Dependent Oxidoreductases Catalysing the S-Selective Reduction of the Imine Substrate 2-Methylpyrroline.
Chembiochem, 16, 2015
5G6S
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BU of 5g6s by Molmil
Imine reductase from Aspergillus oryzae in complex with NADP(H) and (R)-rasagiline
Descriptor: IMINE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RASAGILINE
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2016-06-23
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A reductive aminase from Aspergillus oryzae.
Nat Chem, 9, 2017
5FWN
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BU of 5fwn by Molmil
Imine Reductase from Amycolatopsis orientalis. Closed form in in complex with (R)- Methyltetrahydroisoquinoline
Descriptor: (1R)-1-methyl-1,2,3,4-tetrahydroisoquinoline, IMINE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2016-02-18
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Stereoselectivity and Structural Characterization of an Imine Reductase (Ired) from Amycolatopsis Orientalis
Acs Catalysis, 6, 2016
5G6R
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BU of 5g6r by Molmil
Imine reductase from Aspergillus oryzae
Descriptor: IMINE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Man, H, Aleku, G, Turner, N.J, Grogan, G.
Deposit date:2016-06-23
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A reductive aminase from Aspergillus oryzae.
Nat Chem, 9, 2017
3PCQ
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BU of 3pcq by Molmil
Femtosecond X-ray protein Nanocrystallography
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Chapman, H.N, Fromme, P, Barty, A, White, T.A, Kirian, R.A, Aquila, A, Hunter, M.S, Schulz, J, Deponte, D.P, Weierstall, U, Doak, R.B, Maia, F.R.N.C, Martin, A.V, Schlichting, I, Lomb, L, Coppola, N, Shoeman, R.L, Epp, S.W, Hartmann, R, Rolles, D, Rudenko, A, Foucar, L, Kimmel, N, Weidenspointner, G, Holl, P, Liang, M, Barthelmess, M, Caleman, C, Boutet, S, Bogan, M.J, Krzywinski, J, Bostedt, C, Bajt, S, Gumprecht, L, Rudek, B, Erk, B, Schmidt, C, Homke, A, Reich, C, Pietschner, D, Struder, L, Hauser, G, Gorke, H, Ullrich, J, Herrmann, S, Schaller, G, Schopper, F, Soltau, H, Kuhnel, K.-U, Messerschmidt, M, Bozek, J.D, Hau-Riege, S.P, Frank, M, Hampton, C.Y, Sierra, R, Starodub, D, Williams, G.J, Hajdu, J, Timneanu, N, Seibert, M.M, Andreasson, J, Rocker, A, Jonsson, O, Svenda, M, Stern, S, Nass, K, Andritschke, R, Schroter, C.-D, Krasniqi, F, Bott, M, Schmidt, K.E, Wang, X, Grotjohann, I, Holton, J.M, Barends, T.R.M, Neutze, R, Marchesini, S, Fromme, R, Schorb, S, Rupp, D, Adolph, M, Gorkhover, T, Andersson, I, Hirsemann, H, Potdevin, G, Graafsma, H, Nilsson, B, Spence, J.C.H.
Deposit date:2010-10-21
Release date:2011-02-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (8.984 Å)
Cite:Femtosecond X-ray protein nanocrystallography.
Nature, 470, 2011
108D
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BU of 108d by Molmil
THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
Descriptor: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
Authors:Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
Deposit date:1995-01-31
Release date:1995-06-03
Last modified:2024-03-13
Method:SOLUTION NMR
Cite:Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
1XD2
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BU of 1xd2 by Molmil
Crystal Structure of a ternary Ras:SOS:Ras*GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Sondermann, H, Soisson, S.M, Boykevisch, S, Yang, S.S, Bar-Sagi, D, Kuriyan, J.
Deposit date:2004-09-03
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of autoinhibition in the ras activator son of sevenless.
Cell(Cambridge,Mass.), 119, 2004
7API
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BU of 7api by Molmil
THE S VARIANT OF HUMAN ALPHA1-ANTITRYPSIN, STRUCTURE AND IMPLICATIONS FOR FUNCTION AND METABOLISM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA 1-ANTITRYPSIN, ...
Authors:Loebermann, H, Tokuoka, R, Deisenhofer, J, Huber, R.
Deposit date:1988-09-08
Release date:1990-10-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The S variant of human alpha 1-antitrypsin, structure and implications for function and metabolism.
Protein Eng., 2, 1989
1A0I
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BU of 1a0i by Molmil
ATP-DEPENDENT DNA LIGASE FROM BACTERIOPHAGE T7 COMPLEX WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA LIGASE
Authors:Subramanya, H.S, Doherty, A.J, Ashford, S.R, Wigley, D.B.
Deposit date:1997-12-01
Release date:1998-03-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an ATP-dependent DNA ligase from bacteriophage T7.
Cell(Cambridge,Mass.), 85, 1996
1A0P
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BU of 1a0p by Molmil
SITE-SPECIFIC RECOMBINASE, XERD
Descriptor: SITE-SPECIFIC RECOMBINASE XERD
Authors:Subramanya, H.S, Arciszewska, L.K, Baker, R.A, Bird, L.E, Sherratt, D.J, Wigley, D.B.
Deposit date:1997-12-05
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the site-specific recombinase, XerD.
EMBO J., 16, 1997

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